Bib integration tests in dendron
The .bib is loaded if the path to th .bib is in the header (check in the .md file)
active citation @Gerwick2012a
hardcoded copy pasted citation Gerwick and Moore (2012)
Gerwick, William H, and Bradley S Moore. 2012. “Lessons from the past and charting the future of marine natural products drug discovery and chemical biology.” Chemistry & Biology 19 (1): 85–98. https://doi.org/10.1016/j.chembiol.2011.12.014.
The citation can be previewed only if Markdown Preview Enhanced is loaded. However the links can then not be viewed by Dendron Markdown Preview. Kevin is working on it https://discord.com/channels/717965437182410783/735365126227493004/794977929406185502
Meanwhile a solution is to copy paste the citation from the preview to the .md.
I now hae to check if links are displayed and active when published. Locally, hey are active in the .md
This is how the preview looks like:
References
Here should appear the refs
@Blunt2009
<p>[[projects.tramadol.data]]</p>
<p>This is how the preview looks like:</p>
<p><img src="/assets/images/2021-01-12-12-46-02.png" /></p>
<h1 id="references">References</h1>
<p>Here should appear the refs</p>
<p><span class="citation" data-cites="Blunt2009">@Blunt2009</span></p>
@Blunt2009
2021-01-12 15:32
Just found a pandoc guru https://niszet.hatenablog.com/ and posted an issue on his git repo https://github.com/niszet/pandocplay/issues/5
Pandoc play might be a way to go to have these citation displayed in line.
I use it with the folowing option :
"Pandocplay.Pandoc.args": " -s --bibliography '/Users/pma/Documents/library_red.bib'"
Beware of the space character before the s !
example of outputs
@Brown2012a
@oolonek
@Brown2012a
@Gerwick2012a
@Blunt2009
---
bibliography: /Users/pma/Documents/library_red.bib
---
@Brown2012a
@Gerwick2012a
@Blunt2009
@jimenez-lunaDrugDiscoveryExplainable2020```
Brown and Okuno (2012)
Gerwick and Moore (2012)
Blunt et al. (2009)
(???)
Blunt, John W, Brent R Copp, Wan-Ping Hu, Murray H G Munro, Peter T Northcote, and Michèle R Prinsep. 2009. “Marine natural products.” Natural Product Reports 26 (2): 170–244. https://doi.org/10.1039/b805113p.
Brown, J. B., and Yasushi Okuno. 2012. “Systems Biology and Systems Chemistry: New Directions for Drug Discovery.” Chemistry & Biology 19 (1): 23–28. https://doi.org/10.1016/j.chembiol.2011.12.012.
Gerwick, William H, and Bradley S Moore. 2012. “Lessons from the past and charting the future of marine natural products drug discovery and chemical biology.” Chemistry & Biology 19 (1): 85–98. https://doi.org/10.1016/j.chembiol.2011.12.014.